Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DWX04_02905 | Not Available | Negative | 731352 - 731780 | 15564.9 |
| hypothetical protein | DWX04_02910 | Not Available | Negative | 731872 - 732054 | 7351.07 |
| duf4248 domain-containing protein | DWX04_02915 | Not Available | Positive | 732029 - 732259 | 8949.8 |
| duf3987 domain-containing protein | DWX04_02920 | Not Available | Negative | 732410 - 734788 | 89845.2 |
| hypothetical protein | DWX04_02925 | Not Available | Negative | 734987 - 735184 | 7987.94 |
| upxy family transcription antiterminator | DWX04_02930 | Not Available | Positive | 735463 - 735963 | 18976.7 |
| nucleotidyltransferase domain-containing protein | DWX04_02935 | Not Available | Positive | 736031 - 736321 | 10799.2 |
| toxin-antitoxin system antitoxin subunit | DWX04_02940 | Not Available | Positive | 736318 - 736803 | 19033.9 |
| acyltransferase | DWX04_02945 | Not Available | Positive | 737180 - 737794 | 22961.0 |
| duf2971 domain-containing protein | DWX04_02955 | Not Available | Positive | 738824 - 739615 | 31272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

