Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3868 domain-containing protein | DWX04_02855 | Not Available | Positive | 719195 - 720289 | 40238.9 |
| duf3575 domain-containing protein | DWX04_02860 | Not Available | Positive | 720293 - 720865 | 21549.9 |
| duf3868 domain-containing protein | DWX04_02865 | Not Available | Positive | 720872 - 722281 | 54376.8 |
| hypothetical protein | DWX04_02870 | Not Available | Positive | 722312 - 723850 | 55439.3 |
| hypothetical protein | DWX04_02875 | Not Available | Positive | 723874 - 724821 | 35897.6 |
| site-specific integrase | DWX04_02880 | Not Available | Positive | 724863 - 725807 | 36927.9 |
| undecaprenyl-phosphate glucose phosphotransferase | DWX04_02885 | Not Available | Positive | 725989 - 727392 | 54484.1 |
| polysaccharide export protein | DWX04_02890 | Not Available | Positive | 727441 - 728232 | 28933.2 |
| tyrosine protein kinase | DWX04_02895 | Not Available | Positive | 728241 - 730652 | 89885.9 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_02900 | Not Available | Negative | 730761 - 731210 | 16963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

