Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | DWX04_02700 | Not Available | Negative | 670892 - 671065 | 6352.79 |
| l-lactate permease | DWX04_02705 | Not Available | Negative | 671235 - 672734 | 53110.7 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWX04_02710 | Not Available | Negative | 673000 - 674286 | 46224.8 |
| duf4625 domain-containing protein | DWX04_02715 | Not Available | Negative | 674554 - 675042 | 17845.0 |
| tonb-dependent receptor | DWX04_02720 | Not Available | Negative | 675039 - 677198 | 82040.8 |
| hypothetical protein | DWX04_02725 | Not Available | Negative | 677247 - 677609 | 13833.0 |
| anion permease | DWX04_02730 | Not Available | Negative | 677748 - 678761 | 35981.0 |
| duf47 domain-containing protein | DWX04_02735 | Not Available | Negative | 678778 - 679425 | 25166.3 |
| hypothetical protein | DWX04_02745 | Not Available | Negative | 680243 - 680668 | 16025.4 |
| lrp/asnc family transcriptional regulator | DWX04_02750 | Not Available | Positive | 680860 - 681330 | 17952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

