Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DWX04_02650 | Not Available | Positive | 659753 - 660328 | 21391.5 |
| amp-binding protein | DWX04_02655 | Not Available | Positive | 660335 - 661987 | 62239.3 |
| transporter | DWX04_02660 | Not Available | Negative | 662520 - 663869 | 50738.5 |
| hypothetical protein | DWX04_02665 | Not Available | Negative | 664116 - 664361 | 9244.05 |
| hypothetical protein | DWX04_02670 | Not Available | Negative | 664355 - 664537 | 6924.5 |
| hypothetical protein | DWX04_02675 | Not Available | Negative | 664503 - 664604 | 3624.37 |
| Trna-arg | Not Available | Not Available | Positive | 664746 - 664819 | Not Available |
| transporter | DWX04_02685 | Not Available | Negative | 664897 - 665604 | 26595.3 |
| dna-binding response regulator | DWX04_02690 | Not Available | Negative | 665594 - 666322 | 27616.5 |
| duf5113 domain-containing protein | DWX04_02695 | Not Available | Negative | 666352 - 670743 | 168719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

