Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_02590 | Not Available | Positive | 646447 - 646656 | 8280.6 |
| kama family protein | DWX04_02595 | Not Available | Positive | 646731 - 648842 | 82031.2 |
| tonb-dependent receptor | DWX04_02600 | Not Available | Negative | 648931 - 651264 | 87155.7 |
| hypothetical protein | DWX04_02605 | Not Available | Negative | 651395 - 651733 | 12671.7 |
| bifunctional metallophosphatase/5'-nucleotidase | DWX04_02610 | Not Available | Negative | 651738 - 653480 | 65577.8 |
| sensor histidine kinase | DWX04_02615 | Not Available | Negative | 653492 - 655495 | 75538.5 |
| j domain-containing protein | DWX04_02620 | Not Available | Positive | 655542 - 656513 | 35196.0 |
| hypothetical protein | DWX04_02625 | Not Available | Positive | 656529 - 656816 | 11413.6 |
| yihy/virulence factor brkb family protein | DWX04_02640 | Not Available | Positive | 657485 - 658813 | 50578.4 |
| riboflavin synthase | DWX04_02645 | Not Available | Negative | 658946 - 659548 | 22635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

