Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DWX04_02390 | Not Available | Negative | 587353 - 587610 | 9574.45 |
| beta-acp synthase | DWX04_02395 | Not Available | Negative | 587616 - 589346 | 63765.3 |
| acyl-coa thioesterase | DWX04_02400 | Not Available | Negative | 589331 - 589774 | 17306.7 |
| hydroxymyristoyl-acp dehydratase | DWX04_02405 | Not Available | Negative | 589771 - 590208 | 16399.1 |
| methyltransferase domain-containing protein | DWX04_02410 | Not Available | Negative | 590205 - 591275 | 40576.6 |
| acyltransferase | DWX04_02415 | Not Available | Negative | 591289 - 592173 | 34591.2 |
| acyl carrier protein | DWX04_02420 | Not Available | Negative | 592173 - 592424 | 9584.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWX04_02425 | Not Available | Negative | 592446 - 593675 | 44242.6 |
| 3-oxoacyl-acp reductase fabg | DWX04_02430 | Not Available | Negative | 593683 - 594411 | 26439.8 |
| aromatic amino acid lyase | DWX04_02435 | Not Available | Negative | 594408 - 595979 | 59131.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

