Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_02340 | Not Available | Positive | 575103 - 575306 | 8008.35 |
| glpgli family protein | DWX04_02345 | Not Available | Positive | 575383 - 576183 | 31239.1 |
| glpgli family protein | DWX04_02350 | Not Available | Positive | 576190 - 577044 | 33292.4 |
| hypothetical protein | DWX04_02355 | Not Available | Positive | 577056 - 579665 | 100291.0 |
| glpgli family protein | DWX04_02360 | Not Available | Positive | 580047 - 580856 | 32083.4 |
| hypothetical protein | DWX04_02365 | Not Available | Positive | 580798 - 583470 | 102223.0 |
| polysaccharide deacetylase family protein | DWX04_02370 | Not Available | Negative | 583501 - 584190 | 26481.9 |
| kila-n domain-containing protein | DWX04_02375 | Not Available | Negative | 584241 - 585095 | 33282.9 |
| 3-oxoacyl-acp synthase | DWX04_02380 | Not Available | Negative | 585209 - 586162 | 35325.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWX04_02385 | Not Available | Negative | 586166 - 587356 | 42047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

