Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_02290 | Not Available | Negative | 564202 - 564486 | 9654.48 |
| hydroxymyristoyl-acp dehydratase | DWX04_02295 | Not Available | Negative | 564595 - 564975 | 14330.6 |
| hypothetical protein | DWX04_02300 | Not Available | Negative | 564977 - 565519 | 20765.7 |
| outer membrane lipoprotein carrier protein lola | DWX04_02305 | Not Available | Negative | 565494 - 566129 | 24752.3 |
| tetratricopeptide repeat protein | DWX04_02310 | Not Available | Positive | 566902 - 568416 | 59997.5 |
| duf3244 domain-containing protein | DWX04_02315 | Not Available | Positive | 568508 - 568900 | 14673.7 |
| hypothetical protein | DWX04_02320 | Not Available | Positive | 568916 - 570430 | 57734.0 |
| hypothetical protein | DWX04_02325 | Not Available | Positive | 570802 - 571521 | 27083.6 |
| peptidase domain-containing abc transporter | DWX04_02330 | Not Available | Positive | 571490 - 573676 | 82485.1 |
| hlyd family secretion protein | DWX04_02335 | Not Available | Positive | 573686 - 574981 | 48799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

