Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3108 domain-containing protein | DWX04_02235 | Not Available | Positive | 549529 - 550338 | 31356.0 |
| hypothetical protein | DWX04_02240 | Not Available | Negative | 550427 - 551248 | 30751.9 |
| hypothetical protein | DWX04_02245 | Not Available | Positive | 551408 - 551683 | 10655.9 |
| hypothetical protein | DWX04_02255 | Not Available | Negative | 552720 - 553295 | 21470.0 |
| phenylacetate--coa ligase family protein | DWX04_02260 | Not Available | Negative | 553346 - 554641 | 49526.5 |
| choloylglycine hydrolase | DWX04_02265 | Not Available | Negative | 554643 - 556307 | 63093.3 |
| nad(p)/fad-dependent oxidoreductase | DWX04_02270 | Not Available | Negative | 556300 - 557790 | 56649.0 |
| methyltransferase domain-containing protein | DWX04_02275 | Not Available | Negative | 557783 - 561637 | 146522.0 |
| duf2062 domain-containing protein | DWX04_02280 | Not Available | Negative | 561630 - 562823 | 44775.9 |
| duf4221 domain-containing protein | DWX04_02285 | Not Available | Negative | 562945 - 564129 | 46083.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

