Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | DWX04_02185 | Not Available | Negative | 528730 - 530283 | 57808.5 |
| glycoside hydrolase family 36 | DWX04_02190 | Not Available | Negative | 530302 - 532377 | 78514.9 |
| glycoside hydrolase family 29 | DWX04_02195 | Not Available | Negative | 532384 - 533769 | 52612.5 |
| duf229 domain-containing protein | DWX04_02200 | Not Available | Negative | 533773 - 535209 | 55132.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_02205 | Not Available | Negative | 535446 - 537494 | 77637.2 |
| tonb-dependent receptor | DWX04_02210 | Not Available | Negative | 537507 - 540674 | 118082.0 |
| hybrid sensor histidine kinase/response regulator | DWX04_02215 | Not Available | Positive | 540859 - 544932 | 154704.0 |
| 6-phosphofructokinase | DWX04_02220 | Not Available | Negative | 544942 - 545952 | 35787.3 |
| hypothetical protein | DWX04_02225 | Not Available | Positive | 546100 - 547605 | 57487.1 |
| hypothetical protein | DWX04_02230 | Not Available | Positive | 547610 - 549532 | 73384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

