Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWX04_02085 | Not Available | Negative | 506032 - 506820 | 30708.3 |
| hypothetical protein | DWX04_02090 | Not Available | Negative | 506820 - 507764 | 37323.5 |
| galactofuranosyltransferase | DWX04_02095 | Not Available | Negative | 507771 - 508808 | 39035.2 |
| udp-galactopyranose mutase | DWX04_02100 | Not Available | Negative | 508812 - 509921 | 43221.0 |
| acetyltransferase | DWX04_02105 | Not Available | Negative | 509924 - 510838 | 37437.6 |
| hypothetical protein | DWX04_02110 | Not Available | Negative | 510838 - 511593 | 30055.6 |
| glycosyltransferase family 9 protein | DWX04_02115 | Not Available | Negative | 511609 - 512640 | 38619.5 |
| duf4254 domain-containing protein | DWX04_02120 | Not Available | Negative | 512652 - 513257 | 23737.4 |
| 4-phosphoerythronate dehydrogenase pdxb | DWX04_02125 | Not Available | Positive | 513382 - 514407 | 38267.8 |
| duf4249 domain-containing protein | DWX04_02130 | Not Available | Negative | 514572 - 515537 | 36369.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

