Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | DWX04_01980 | Not Available | Negative | 477524 - 478513 | 37212.5 |
| u32 family peptidase | DWX04_01985 | Not Available | Positive | 478664 - 479926 | 47014.9 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_01990 | Not Available | Negative | 480214 - 481764 | 58655.7 |
| arginine--trna ligase | DWX04_02000 | Not Available | Positive | 485475 - 487295 | 68031.7 |
| ribonuclease h | DWX04_02005 | Not Available | Positive | 487296 - 487922 | 23847.5 |
| alkaline phosphatase family protein | DWX04_02010 | Not Available | Positive | 487938 - 489764 | 68081.4 |
| histidinol-phosphate aminotransferase family protein | DWX04_02015 | Not Available | Positive | 489855 - 490904 | 40321.4 |
| phosphocholine cytidylyltransferase family protein | DWX04_02020 | Not Available | Positive | 490901 - 491632 | 27444.8 |
| licd family protein | DWX04_02025 | Not Available | Positive | 491637 - 492449 | 31901.8 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | DWX04_02030 | Not Available | Positive | 492439 - 494136 | 64653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

