Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | DWX04_01930 | Not Available | Negative | 464172 - 465440 | 45595.0 |
| s9 family peptidase | DWX04_01935 | Not Available | Negative | 465456 - 467669 | 83553.3 |
| rna methyltransferase | DWX04_01940 | Not Available | Negative | 467676 - 469124 | 56304.4 |
| type ii toxin-antitoxin system hicb family antitoxin | DWX04_01945 | Not Available | Negative | 469636 - 469827 | 7388.35 |
| serine acetyltransferase | DWX04_01950 | Not Available | Negative | 469978 - 470886 | 32799.2 |
| ribonuclease r | DWX04_01955 | Not Available | Negative | 471187 - 473334 | 81953.4 |
| cation transporter | DWX04_01960 | Not Available | Positive | 473465 - 474367 | 32965.4 |
| nad(p)-dependent oxidoreductase | DWX04_01965 | Not Available | Positive | 474378 - 475424 | 40048.2 |
| phosphatase pap2 family protein | DWX04_01970 | Not Available | Positive | 475415 - 476392 | 37802.7 |
| duf2807 domain-containing protein | DWX04_01975 | Not Available | Positive | 476569 - 477420 | 29089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

