Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | DWX04_22280 | Not Available | Negative | 5115424 - 5116869 | 51811.8 |
| hypothetical protein | DWX04_22285 | Not Available | Positive | 5116873 - 5117129 | 9774.56 |
| hypothetical protein | DWX04_22290 | Not Available | Negative | 5117078 - 5118262 | 45439.2 |
| hypothetical protein | DWX04_22295 | Not Available | Negative | 5118374 - 5119204 | 31199.7 |
| hypothetical protein | DWX04_22300 | Not Available | Negative | 5119271 - 5119573 | 11571.3 |
| site-specific integrase | DWX04_22305 | Not Available | Positive | 5119574 - 5119923 | 12965.0 |
| hypothetical protein | DWX04_22315 | Not Available | Positive | 5120254 - 5120640 | 15088.7 |
| peptidase m15 | DWX04_22320 | Not Available | Positive | 5120637 - 5120749 | 4168.06 |
| hypothetical protein | DWX04_22325 | Not Available | Negative | 5120750 - 5121526 | 30139.0 |
| hypothetical protein | DWX04_22330 | Not Available | Negative | 5121513 - 5121839 | 12226.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

