Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1593 domain-containing protein | DWX04_01830 | Not Available | Positive | 438748 - 440103 | 51247.5 |
| aaa family atpase | DWX04_01835 | Not Available | Negative | 440155 - 441882 | 67981.9 |
| l-aspartate oxidase | DWX04_01840 | Not Available | Negative | 442132 - 443712 | 58967.6 |
| orf6n domain-containing protein | DWX04_01845 | Not Available | Positive | 443868 - 444428 | 21549.0 |
| hypothetical protein | DWX04_01850 | Not Available | Positive | 444504 - 444914 | 15494.5 |
| hypothetical protein | DWX04_01855 | Not Available | Positive | 444918 - 445331 | 15716.4 |
| dihydrolipoyl dehydrogenase | DWX04_01860 | Not Available | Positive | 445347 - 446687 | 47681.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DWX04_01865 | Not Available | Positive | 446687 - 448087 | 52320.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DWX04_01870 | Not Available | Positive | 448258 - 449100 | 31850.9 |
| gluconate 5-dehydrogenase | DWX04_01875 | Not Available | Positive | 449137 - 449940 | 28590.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

