Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_22215 | Not Available | Negative | 5106520 - 5106843 | 11898.3 |
| hypothetical protein | DWX04_22225 | Not Available | Negative | 5107163 - 5107471 | 11453.6 |
| site-specific integrase | DWX04_22230 | Not Available | Positive | 5107581 - 5107864 | 11340.8 |
| is66-like element isbvu4 family transposase | DWX04_22235 | Not Available | Negative | 5107928 - 5109541 | 61951.9 |
| single-stranded dna-binding protein | DWX04_22245 | Not Available | Positive | 5110683 - 5111081 | 14892.7 |
| hypothetical protein | DWX04_22250 | Not Available | Negative | 5111224 - 5111421 | 6984.11 |
| hypothetical protein | DWX04_22260 | Not Available | Positive | 5111836 - 5112027 | 6879.01 |
| hypothetical protein | DWX04_22265 | Not Available | Positive | 5112024 - 5112236 | 7920.51 |
| dde transposase | DWX04_22270 | Not Available | Positive | 5112395 - 5113753 | 52858.8 |
| hypothetical protein | DWX04_22275 | Not Available | Positive | 5113934 - 5115423 | 55658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

