Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21895 | Not Available | Negative | 5039305 - 5039529 | 8291.1 |
| hypothetical protein | DWX04_21905 | Not Available | Negative | 5041338 - 5044427 | 112954.0 |
| arac family transcriptional regulator | DWX04_21910 | Not Available | Negative | 5044491 - 5044961 | 18665.7 |
| hypothetical protein | DWX04_21915 | Not Available | Negative | 5045629 - 5046345 | 27019.2 |
| hypothetical protein | DWX04_21920 | Not Available | Negative | 5046351 - 5046785 | 16666.1 |
| hypothetical protein | DWX04_21925 | Not Available | Negative | 5046782 - 5047117 | 12475.4 |
| hypothetical protein | DWX04_21930 | Not Available | Negative | 5047284 - 5047511 | 8552.1 |
| hypothetical protein | DWX04_21935 | Not Available | Positive | 5047578 - 5047829 | 8926.76 |
| hypothetical protein | DWX04_21940 | Not Available | Positive | 5048449 - 5048781 | 12441.7 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 5049039 - 5049433 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

