Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21845 | Not Available | Negative | 5029997 - 5030221 | 8693.56 |
| hypothetical protein | DWX04_21850 | Not Available | Positive | 5030677 - 5030859 | 6132.43 |
| duf3871 family protein | DWX04_21855 | Not Available | Positive | 5031019 - 5032056 | 39440.1 |
| hypothetical protein | DWX04_21860 | Not Available | Positive | 5032149 - 5032430 | 10765.8 |
| hypothetical protein | DWX04_21865 | Not Available | Positive | 5032537 - 5034144 | 63037.0 |
| hypothetical protein | DWX04_21870 | Not Available | Positive | 5034113 - 5035090 | 37616.3 |
| hypothetical protein | DWX04_21875 | Not Available | Positive | 5035225 - 5035578 | 13631.3 |
| serine recombinase | DWX04_21880 | Not Available | Positive | 5035746 - 5036432 | 25893.5 |
| hypothetical protein | DWX04_21885 | Not Available | Positive | 5036437 - 5036670 | 9126.81 |
| hypothetical protein | DWX04_21890 | Not Available | Positive | 5037817 - 5038143 | 11666.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

