Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21795 | Not Available | Negative | 5018114 - 5018455 | 13067.8 |
| hypothetical protein | DWX04_21800 | Not Available | Positive | 5018889 - 5019173 | 10117.2 |
| hypothetical protein | DWX04_21805 | Not Available | Negative | 5019450 - 5019812 | 14269.0 |
| pas domain-containing protein | DWX04_21810 | Not Available | Negative | 5020394 - 5021689 | 49040.2 |
| sigma-54-dependent fis family transcriptional regulator | DWX04_21815 | Not Available | Negative | 5021712 - 5023067 | 50734.5 |
| tolc family protein | DWX04_21820 | Not Available | Negative | 5023153 - 5024637 | 56980.8 |
| abc transporter permease | DWX04_21825 | Not Available | Negative | 5024791 - 5026035 | 47901.9 |
| multidrug abc transporter substrate-binding protein | DWX04_21830 | Not Available | Negative | 5026049 - 5027305 | 47318.6 |
| abc transporter permease | DWX04_21835 | Not Available | Negative | 5027328 - 5028599 | 48218.1 |
| abc transporter permease | DWX04_21840 | Not Available | Negative | 5028603 - 5029883 | 47746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

