Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DWX04_21745 | Not Available | Positive | 5006265 - 5007368 | 41315.4 |
| hypothetical protein | DWX04_21750 | Not Available | Positive | 5007365 - 5007640 | 11556.8 |
| hypothetical protein | DWX04_21755 | Not Available | Positive | 5007637 - 5008518 | 33838.2 |
| hypothetical protein | DWX04_21760 | Not Available | Negative | 5009158 - 5009382 | 8333.12 |
| hypothetical protein | DWX04_21765 | Not Available | Negative | 5010627 - 5011460 | 32427.2 |
| lamg domain-containing protein | DWX04_21770 | Not Available | Negative | 5011474 - 5012268 | 29680.9 |
| hypothetical protein | DWX04_21775 | Not Available | Negative | 5012404 - 5015703 | 120068.0 |
| arac family transcriptional regulator | DWX04_21780 | Not Available | Negative | 5015809 - 5016279 | 18495.6 |
| hypothetical protein | DWX04_21785 | Not Available | Negative | 5016965 - 5017681 | 27025.4 |
| hypothetical protein | DWX04_21790 | Not Available | Negative | 5017686 - 5018117 | 16441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

