Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DWX04_01780 | Not Available | Negative | 416062 - 417810 | 68178.9 |
| glycoside hydrolase family 97 protein | DWX04_01785 | Not Available | Positive | 418182 - 420905 | 103290.0 |
| glycoside hydrolase | DWX04_01790 | Not Available | Positive | 420942 - 423344 | 90087.1 |
| glycoside hydrolase family 127 protein | DWX04_01795 | Not Available | Positive | 423415 - 425820 | 89605.9 |
| s9 family peptidase | DWX04_01800 | Not Available | Positive | 425832 - 428075 | 85786.9 |
| tonb-dependent receptor | DWX04_01805 | Not Available | Positive | 428605 - 431940 | 122693.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_01810 | Not Available | Positive | 431953 - 433992 | 76712.5 |
| hypothetical protein | DWX04_01815 | Not Available | Positive | 434012 - 436321 | 86340.0 |
| hypothetical protein | DWX04_01820 | Not Available | Negative | 436352 - 436606 | 10260.6 |
| pectate lyase | DWX04_01825 | Not Available | Positive | 436590 - 438731 | 81698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

