Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upxy family transcription antiterminator | DWX04_21695 | Not Available | Positive | 4996572 - 4997126 | 21105.9 |
| hypothetical protein | DWX04_21700 | Not Available | Positive | 4997453 - 4997734 | 11034.2 |
| sugar transporter | DWX04_21705 | Not Available | Positive | 4997780 - 4999321 | 58840.3 |
| glycosyltransferase family 2 protein | DWX04_21710 | Not Available | Positive | 4999396 - 5000418 | 39849.3 |
| alpha-1,2-fucosyltransferase | DWX04_21715 | Not Available | Positive | 5000509 - 5001384 | 34888.1 |
| hypothetical protein | DWX04_21720 | Not Available | Positive | 5001627 - 5002622 | 38959.1 |
| glycosyltransferase family 2 protein | DWX04_21725 | Not Available | Positive | 5002594 - 5003490 | 35279.6 |
| hypothetical protein | DWX04_21730 | Not Available | Positive | 5003497 - 5004357 | 33216.7 |
| is982 family transposase | DWX04_21735 | Not Available | Positive | 5004465 - 5005370 | 34959.9 |
| glycosyltransferase family 2 protein | DWX04_21740 | Not Available | Positive | 5005431 - 5006249 | 32267.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

