Phocaeicola vulgatus strain AF18-14

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AF18-14 is a Gram-positive, anaerobic rod-shaped bacterium primarily associated with the human host, Homo sapiens. This strain is characterized by a single cell arrangement and is non-motile, lacking the ability to move independently. Notably, it possesses flagella, which may play a role in its interaction with the host environment, despite its immobility. The strain is mesophilic, indicating that it thrives in moderate temperature ranges, which aligns with the typical conditions found within the human body. Phocaeicola vulgatus strain AF18-14 has a unique cellular structure, featuring two membranes and a singular replicon, which are characteristic traits of bacteria in its classification. Belonging to a free-living biotic relationship, this strain can exist independently outside of host organisms, yet it is predominantly found in association with humans. Its ecological role may include contributions to the human microbiome, where it could influence gut health and metabolic processes. The accession number for this strain is QRXI00000000.1, which allows for further exploration and study within microbiological databases. Understanding the traits and ecological significance of Phocaeicola vulgatus strain AF18-14 can provide insights into its potential impacts on human health and its role within the complex ecosystem of the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
Strainstrain AF18-14

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AF18-14
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
upxy family transcription antiterminatorDWX04_21695Not AvailablePositive4996572 - 499712621105.9
hypothetical proteinDWX04_21700Not AvailablePositive4997453 - 499773411034.2
sugar transporterDWX04_21705Not AvailablePositive4997780 - 499932158840.3
glycosyltransferase family 2 proteinDWX04_21710Not AvailablePositive4999396 - 500041839849.3
alpha-1,2-fucosyltransferaseDWX04_21715Not AvailablePositive5000509 - 500138434888.1
hypothetical proteinDWX04_21720Not AvailablePositive5001627 - 500262238959.1
glycosyltransferase family 2 proteinDWX04_21725Not AvailablePositive5002594 - 500349035279.6
hypothetical proteinDWX04_21730Not AvailablePositive5003497 - 500435733216.7
is982 family transposaseDWX04_21735Not AvailablePositive5004465 - 500537034959.9
glycosyltransferase family 2 proteinDWX04_21740Not AvailablePositive5005431 - 500624932267.2

Displaying genes 4181 – 4190 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.