Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21535 | Not Available | Positive | 4950589 - 4951068 | 18314.3 |
| hypothetical protein | DWX04_21540 | Not Available | Positive | 4951164 - 4951715 | 20283.7 |
| ph domain-containing protein | DWX04_21545 | Not Available | Positive | 4951719 - 4952210 | 19133.6 |
| naat family transporter | DWX04_21550 | Not Available | Positive | 4952348 - 4952992 | 23868.2 |
| sorbitol dehydrogenase | DWX04_21555 | Not Available | Negative | 4953065 - 4954084 | 36707.0 |
| l-fucose:h+ symporter permease | DWX04_21560 | Not Available | Negative | 4954107 - 4955366 | 47261.1 |
| amidohydrolase | DWX04_21565 | Not Available | Negative | 4955393 - 4956316 | 35621.2 |
| aldo/keto reductase | DWX04_21570 | Not Available | Negative | 4956334 - 4957266 | 34845.4 |
| arac family transcriptional regulator | DWX04_21575 | Not Available | Negative | 4957384 - 4958244 | 33567.5 |
| alpha-l-fucosidase | DWX04_21580 | Not Available | Positive | 4958486 - 4960132 | 62680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

