Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21485 | Not Available | Positive | 4940662 - 4941714 | 37546.7 |
| hypothetical protein | DWX04_21490 | Not Available | Positive | 4941721 - 4942350 | 23916.5 |
| conjugative transposon protein tram | DWX04_21495 | Not Available | Positive | 4942358 - 4943668 | 50179.9 |
| hypothetical protein | DWX04_21500 | Not Available | Positive | 4943668 - 4943847 | 6910.02 |
| duf4138 domain-containing protein | DWX04_21505 | Not Available | Positive | 4943844 - 4944926 | 41881.2 |
| duf3945 domain-containing protein | DWX04_21510 | Not Available | Positive | 4944932 - 4946743 | 68541.6 |
| hypothetical protein | DWX04_21515 | Not Available | Positive | 4946794 - 4946982 | 7135.18 |
| duf1738 domain-containing protein | DWX04_21520 | Not Available | Positive | 4946986 - 4948296 | 49964.6 |
| single-stranded dna-binding protein | DWX04_21525 | Not Available | Positive | 4948300 - 4948596 | 10999.2 |
| conjugal transfer protein trag | DWX04_21530 | Not Available | Positive | 4948596 - 4950551 | 72856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

