Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21420 | Not Available | Negative | 4930879 - 4931769 | 33916.2 |
| abc transporter atp-binding protein | DWX04_21425 | Not Available | Negative | 4931784 - 4932626 | 31509.3 |
| hypothetical protein | DWX04_21445 | Not Available | Positive | 4935265 - 4935828 | 21578.9 |
| hypothetical protein | DWX04_21450 | Not Available | Positive | 4935831 - 4936031 | 7207.36 |
| hypothetical protein | DWX04_21455 | Not Available | Positive | 4936016 - 4936426 | 15401.4 |
| hypothetical protein | DWX04_21460 | Not Available | Positive | 4936464 - 4936802 | 12183.5 |
| hypothetical protein | DWX04_21465 | Not Available | Positive | 4936806 - 4937114 | 11572.8 |
| duf3875 domain-containing protein | DWX04_21470 | Not Available | Positive | 4937212 - 4939827 | 99891.4 |
| hypothetical protein | DWX04_21475 | Not Available | Positive | 4939820 - 4940038 | 7945.74 |
| hypothetical protein | DWX04_21480 | Not Available | Positive | 4940054 - 4940653 | 22530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

