Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DWX04_21320 | Not Available | Positive | 4913235 - 4913930 | 27621.8 |
| glycosyltransferase | DWX04_21325 | Not Available | Positive | 4913931 - 4914737 | 31513.4 |
| sugar transferase | DWX04_21330 | Not Available | Positive | 4914810 - 4915439 | 24971.5 |
| hypothetical protein | DWX04_21335 | Not Available | Positive | 4915439 - 4915714 | 11484.7 |
| hypothetical protein | DWX04_21340 | Not Available | Positive | 4915711 - 4916185 | 18238.7 |
| hypothetical protein | DWX04_21345 | Not Available | Positive | 4916196 - 4916853 | 24908.3 |
| hypothetical protein | DWX04_21350 | Not Available | Positive | 4916862 - 4917284 | 16529.5 |
| elongation factor ts | DWX04_21355 | Not Available | Negative | 4917935 - 4918924 | 35504.8 |
| 30s ribosomal protein s2 | DWX04_21360 | Not Available | Negative | 4919057 - 4919896 | 30564.9 |
| 30s ribosomal protein s9 | DWX04_21365 | Not Available | Negative | 4920029 - 4920415 | 14527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

