Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | DWX04_21210 | Not Available | Positive | 4885781 - 4887271 | 56948.5 |
| hypothetical protein | DWX04_21215 | Not Available | Positive | 4887317 - 4888513 | 47865.6 |
| hypothetical protein | DWX04_21220 | Not Available | Positive | 4888553 - 4889104 | 21492.5 |
| atp-binding protein | DWX04_21225 | Not Available | Positive | 4889088 - 4892750 | 142703.0 |
| hypothetical protein | DWX04_21230 | Not Available | Positive | 4892768 - 4893646 | 33862.3 |
| hypothetical protein | DWX04_21240 | Not Available | Positive | 4894918 - 4899849 | 191692.0 |
| energy transducer tonb | DWX04_21250 | Not Available | Positive | 4900416 - 4901147 | 27575.9 |
| hypothetical protein | DWX04_21255 | Not Available | Positive | 4902002 - 4902403 | 15525.5 |
| hypothetical protein | DWX04_21260 | Not Available | Negative | 4902430 - 4903173 | 29185.6 |
| upxy family transcription antiterminator | DWX04_21265 | Not Available | Positive | 4903553 - 4904110 | 21662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

