Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_21100 | Not Available | Negative | 4871542 - 4871868 | 12621.5 |
| hypothetical protein | DWX04_21105 | Not Available | Negative | 4871816 - 4871995 | 6948.46 |
| hypothetical protein | DWX04_21110 | Not Available | Negative | 4872195 - 4873166 | 37692.9 |
| hypothetical protein | DWX04_21115 | Not Available | Negative | 4873372 - 4873611 | 9395.86 |
| mobilization protein | DWX04_21120 | Not Available | Negative | 4873631 - 4875049 | 54596.8 |
| plasmid mobilization relaxosome protein mobc | DWX04_21125 | Not Available | Negative | 4875046 - 4875354 | 11845.6 |
| para family protein | DWX04_21130 | Not Available | Positive | 4875859 - 4876554 | 26185.4 |
| hypothetical protein | DWX04_21135 | Not Available | Positive | 4876559 - 4877047 | 18275.0 |
| recombinase family protein | DWX04_21145 | Not Available | Negative | 4877404 - 4877991 | 22065.8 |
| hypothetical protein | DWX04_21150 | Not Available | Negative | 4878128 - 4878451 | 11964.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

