Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | DWX04_20985 | Not Available | Positive | 4847186 - 4848247 | 39089.9 |
| ahpc/tsa family protein | DWX04_20990 | Not Available | Positive | 4848379 - 4849524 | 42891.5 |
| peptide-methionine (s)-s-oxide reductase | DWX04_20995 | Not Available | Negative | 4849593 - 4850078 | 18625.0 |
| tetratricopeptide repeat protein | DWX04_21000 | Not Available | Positive | 4850196 - 4851050 | 32582.4 |
| dna helicase recq | DWX04_21005 | Not Available | Negative | 4851148 - 4852965 | 69130.0 |
| arac family transcriptional regulator | DWX04_21010 | Not Available | Positive | 4853297 - 4853764 | 18149.8 |
| dihydrofolate reductase | DWX04_21015 | Not Available | Positive | 4853870 - 4855882 | 76581.0 |
| dna alkylation repair protein | DWX04_21020 | Not Available | Positive | 4855891 - 4856559 | 25707.3 |
| transcriptional repressor | DWX04_21025 | Not Available | Positive | 4856590 - 4857081 | 19166.0 |
| adenylosuccinate synthase | DWX04_21030 | Not Available | Positive | 4857098 - 4858369 | 46880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

