Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DWX04_20935 | Not Available | Negative | 4836137 - 4836775 | 23867.1 |
| sugar o-acetyltransferase | DWX04_20940 | Not Available | Negative | 4836780 - 4837376 | 21793.6 |
| arac family transcriptional regulator | DWX04_20945 | Not Available | Positive | 4837487 - 4838326 | 32960.8 |
| winged helix-turn-helix transcriptional regulator | DWX04_20950 | Not Available | Positive | 4838404 - 4839777 | 51384.6 |
| dna-binding protein | DWX04_20955 | Not Available | Positive | 4839822 - 4840169 | 13617.4 |
| hypothetical protein | DWX04_20960 | Not Available | Positive | 4840182 - 4841378 | 47330.0 |
| 2-isopropylmalate synthase | DWX04_20965 | Not Available | Positive | 4842060 - 4843556 | 54423.0 |
| 3-isopropylmalate dehydratase large subunit | DWX04_20970 | Not Available | Positive | 4843574 - 4844956 | 50049.1 |
| 3-isopropylmalate dehydratase small subunit | DWX04_20975 | Not Available | Positive | 4844970 - 4845566 | 22407.5 |
| 2-isopropylmalate synthase | DWX04_20980 | Not Available | Positive | 4845572 - 4847092 | 56923.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

