Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4121 family protein | DWX04_20880 | Not Available | Positive | 4825966 - 4826745 | 30552.3 |
| dna primase | DWX04_20885 | Not Available | Negative | 4826846 - 4827709 | 32975.7 |
| hypothetical protein | DWX04_20890 | Not Available | Positive | 4828172 - 4828813 | 23925.0 |
| hypothetical protein | DWX04_20895 | Not Available | Positive | 4829383 - 4829949 | 21974.7 |
| hypothetical protein | DWX04_20900 | Not Available | Negative | 4830043 - 4831182 | 46086.6 |
| hypothetical protein | DWX04_20905 | Not Available | Negative | 4831271 - 4832179 | 35459.1 |
| hypothetical protein | DWX04_20910 | Not Available | Negative | 4832251 - 4832979 | 28470.5 |
| dna-binding protein | DWX04_20915 | Not Available | Negative | 4833657 - 4833893 | 9099.1 |
| site-specific integrase | DWX04_20920 | Not Available | Negative | 4833886 - 4835127 | 47968.3 |
| hypothetical protein | DWX04_20925 | Not Available | Positive | 4835479 - 4835670 | 7293.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

