Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_20730 | Not Available | Positive | 4797892 - 4798806 | 34852.6 |
| hypothetical protein | DWX04_20735 | Not Available | Positive | 4798831 - 4801104 | 88732.6 |
| atp-binding protein | DWX04_20740 | Not Available | Positive | 4801289 - 4802521 | 46718.8 |
| hypothetical protein | DWX04_20745 | Not Available | Positive | 4802518 - 4803021 | 19587.3 |
| pseudohemocyanin | DWX04_20750 | Not Available | Positive | 4803129 - 4804109 | 38212.2 |
| tetr/acrr family transcriptional regulator | DWX04_20755 | Not Available | Positive | 4804580 - 4805221 | 25286.9 |
| 3-oxoacyl-acp synthase | DWX04_20760 | Not Available | Positive | 4805226 - 4806365 | 42377.4 |
| tetr/acrr family transcriptional regulator | DWX04_20765 | Not Available | Positive | 4806602 - 4807126 | 20314.6 |
| hypothetical protein | DWX04_20770 | Not Available | Negative | 4807175 - 4807414 | 9306.7 |
| response regulator | DWX04_20775 | Not Available | Positive | 4807395 - 4809662 | 85330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

