Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dabb family protein | DWX04_20630 | Not Available | Positive | 4780588 - 4780887 | 11090.4 |
| paai family thioesterase | DWX04_20635 | Not Available | Positive | 4780898 - 4781389 | 18785.7 |
| atp phosphoribosyltransferase | DWX04_20640 | Not Available | Positive | 4781618 - 4782469 | 31336.4 |
| histidinol dehydrogenase | DWX04_20645 | Not Available | Positive | 4782519 - 4783799 | 46530.2 |
| histidinol-phosphate transaminase | DWX04_20650 | Not Available | Positive | 4783802 - 4784842 | 39610.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DWX04_20655 | Not Available | Positive | 4784846 - 4785964 | 42221.7 |
| nad(+) synthase | DWX04_20660 | Not Available | Negative | 4786054 - 4787979 | 71128.6 |
| transcriptional repressor | DWX04_20665 | Not Available | Positive | 4788144 - 4788554 | 15560.8 |
| nadh peroxidase | DWX04_20670 | Not Available | Positive | 4788632 - 4789183 | 20566.4 |
| thioredoxin | DWX04_20675 | Not Available | Negative | 4789287 - 4789745 | 16958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

