Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_20560 | Not Available | Positive | 4769759 - 4770244 | 18077.0 |
| hypothetical protein | DWX04_20565 | Not Available | Negative | 4770344 - 4771591 | 49284.0 |
| hypothetical protein | DWX04_20570 | Not Available | Negative | 4771593 - 4771868 | 10456.5 |
| hypothetical protein | DWX04_20575 | Not Available | Positive | 4771935 - 4772102 | 6488.94 |
| hypothetical protein | DWX04_20600 | Not Available | Negative | 4775036 - 4775470 | 16960.1 |
| hypothetical protein | DWX04_20605 | Not Available | Positive | 4776144 - 4777487 | 51653.8 |
| hypothetical protein | DWX04_20610 | Not Available | Positive | 4778019 - 4778204 | 6642.76 |
| hypothetical protein | DWX04_20615 | Not Available | Positive | 4778216 - 4778476 | 10081.1 |
| lytic transglycosylase f | DWX04_20620 | Not Available | Negative | 4778492 - 4779874 | 52181.3 |
| uridine kinase | DWX04_20625 | Not Available | Negative | 4779871 - 4780482 | 23271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

