Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DWX04_20510 | Not Available | Positive | 4760323 - 4761606 | 48409.8 |
| hypothetical protein | DWX04_20515 | Not Available | Positive | 4761603 - 4761788 | 7049.84 |
| duf4138 domain-containing protein | DWX04_20520 | Not Available | Positive | 4761801 - 4762913 | 43021.0 |
| duf3945 domain-containing protein | DWX04_20525 | Not Available | Positive | 4762910 - 4764382 | 55464.1 |
| hypothetical protein | DWX04_20530 | Not Available | Positive | 4764401 - 4764586 | 7257.29 |
| duf1738 domain-containing protein | DWX04_20535 | Not Available | Positive | 4764590 - 4765783 | 45440.1 |
| single-stranded dna-binding protein | DWX04_20540 | Not Available | Positive | 4765761 - 4766144 | 14157.7 |
| conjugal transfer protein trag | DWX04_20545 | Not Available | Positive | 4766156 - 4768102 | 72900.5 |
| hypothetical protein | DWX04_20550 | Not Available | Positive | 4768125 - 4768544 | 15091.9 |
| hypothetical protein | DWX04_20555 | Not Available | Positive | 4768680 - 4769705 | 39568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

