Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_20310 | Not Available | Positive | 4727258 - 4727671 | 15304.8 |
| duf3873 domain-containing protein | DWX04_20315 | Not Available | Positive | 4727675 - 4727896 | 8540.09 |
| hypothetical protein | DWX04_20320 | Not Available | Positive | 4727890 - 4728189 | 11372.4 |
| hypothetical protein | DWX04_20325 | Not Available | Positive | 4728506 - 4729096 | 22583.7 |
| methyltransferase domain-containing protein | DWX04_20330 | Not Available | Positive | 4729093 - 4730514 | 53975.9 |
| dna packaging protein | DWX04_20335 | Not Available | Positive | 4730518 - 4731060 | 20861.6 |
| phage portal protein | DWX04_20340 | Not Available | Positive | 4731062 - 4732378 | 50384.5 |
| hypothetical protein | DWX04_20345 | Not Available | Positive | 4732375 - 4732911 | 20486.9 |
| hypothetical protein | DWX04_20350 | Not Available | Positive | 4732908 - 4733372 | 17456.4 |
| hypothetical protein | DWX04_20355 | Not Available | Positive | 4733356 - 4733838 | 18039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

