Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DWX04_01630 | Not Available | Negative | 366765 - 367631 | 33272.9 |
| pspc domain-containing protein | DWX04_01635 | Not Available | Positive | 367799 - 368035 | 9155.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DWX04_01640 | Not Available | Negative | 368045 - 368446 | 15118.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DWX04_01645 | Not Available | Negative | 368446 - 369816 | 51922.9 |
| hypothetical protein | DWX04_01650 | Not Available | Positive | 370154 - 370504 | 13602.7 |
| acetyl-coa hydrolase/transferase family protein | DWX04_01655 | Not Available | Positive | 370542 - 372035 | 54026.7 |
| glycoside hydrolase family 3 protein | DWX04_01660 | Not Available | Positive | 372221 - 374815 | 96013.0 |
| abc transporter atp-binding protein | DWX04_01665 | Not Available | Negative | 374905 - 376497 | 59404.7 |
| arylsulfatase | DWX04_01670 | Not Available | Negative | 376754 - 378280 | 57753.4 |
| protease | DWX04_01675 | Not Available | Positive | 378413 - 381637 | 120760.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

