Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate butyryltransferase | DWX04_20050 | Not Available | Negative | 4684145 - 4685053 | 33315.3 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DWX04_20055 | Not Available | Positive | 4685136 - 4686893 | 64868.1 |
| glutamine cyclotransferase | DWX04_20060 | Not Available | Positive | 4686962 - 4687966 | 37858.6 |
| sufe family protein | DWX04_20065 | Not Available | Positive | 4687978 - 4688406 | 16169.5 |
| tonb-dependent receptor | DWX04_20070 | Not Available | Negative | 4688442 - 4690514 | 79117.4 |
| sensor histidine kinase | DWX04_20075 | Not Available | Positive | 4690566 - 4692104 | 59598.5 |
| dna-binding response regulator | DWX04_20080 | Not Available | Positive | 4692109 - 4692792 | 26125.7 |
| sam-dependent methyltransferase | DWX04_20085 | Not Available | Negative | 4692789 - 4693973 | 43841.1 |
| d-alanyl-d-alanine dipeptidase | DWX04_20090 | Not Available | Negative | 4693977 - 4694642 | 25264.8 |
| transcriptional regulator | DWX04_20095 | Not Available | Negative | 4694666 - 4695013 | 13249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

