Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_20000 | Not Available | Negative | 4677606 - 4677860 | 9356.24 |
| hypothetical protein | DWX04_20005 | Not Available | Positive | 4678106 - 4678318 | 7928.86 |
| hypothetical protein | DWX04_20010 | Not Available | Negative | 4678315 - 4678527 | 7772.38 |
| hypothetical protein | DWX04_20015 | Not Available | Positive | 4678694 - 4679173 | 18282.5 |
| hypothetical protein | DWX04_20020 | Not Available | Positive | 4679230 - 4679493 | 10334.2 |
| sam-dependent dna methyltransferase | DWX04_20025 | Not Available | Positive | 4679509 - 4680234 | 27690.7 |
| hypothetical protein | DWX04_20030 | Not Available | Positive | 4680264 - 4680587 | 12496.2 |
| hypothetical protein | DWX04_20035 | Not Available | Positive | 4680587 - 4680940 | 13675.7 |
| helicase | DWX04_20040 | Not Available | Positive | 4681680 - 4682930 | 48035.2 |
| butyrate kinase | DWX04_20045 | Not Available | Negative | 4683068 - 4684132 | 38268.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

