Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_19950 | Not Available | Negative | 4673469 - 4673798 | 13134.9 |
| hypothetical protein | DWX04_19955 | Not Available | Negative | 4673815 - 4674057 | 9354.34 |
| dna-binding protein | DWX04_19960 | Not Available | Negative | 4674005 - 4674667 | 25696.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | DWX04_19965 | Not Available | Positive | 4675101 - 4675349 | 9215.99 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DWX04_19970 | Not Available | Positive | 4675343 - 4675663 | 12172.9 |
| exo-poly-alpha-d-galacturonosidase | DWX04_19975 | Not Available | Positive | 4675713 - 4676111 | 15724.6 |
| integration host factor subunit beta | DWX04_19980 | Not Available | Positive | 4676211 - 4676495 | 10441.8 |
| hypothetical protein | DWX04_19985 | Not Available | Positive | 4676508 - 4676780 | 10513.6 |
| hypothetical protein | DWX04_19990 | Not Available | Negative | 4676842 - 4677219 | 14970.8 |
| hypothetical protein | DWX04_19995 | Not Available | Negative | 4677234 - 4677560 | 12710.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

