Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWX04_19885 | Not Available | Positive | 4663759 - 4664658 | 35622.9 |
| arac family transcriptional regulator | DWX04_19890 | Not Available | Positive | 4664918 - 4665577 | 25862.6 |
| plasmid mobilization relaxosome protein mobc | DWX04_19895 | Not Available | Negative | 4665599 - 4666546 | 35772.0 |
| plasmid mobilization relaxosome protein mobc | DWX04_19900 | Not Available | Negative | 4666543 - 4666935 | 14997.3 |
| hypothetical protein | DWX04_19920 | Not Available | Positive | 4668668 - 4669876 | 46776.3 |
| dna repair protein | DWX04_19925 | Not Available | Positive | 4670722 - 4671384 | 25053.4 |
| hypothetical protein | DWX04_19930 | Not Available | Positive | 4671353 - 4671583 | 8834.8 |
| hypothetical protein | DWX04_19935 | Not Available | Positive | 4671561 - 4671971 | 15513.7 |
| hypothetical protein | DWX04_19940 | Not Available | Positive | 4672320 - 4672718 | 15662.7 |
| recombinase family protein | DWX04_19945 | Not Available | Negative | 4672831 - 4673427 | 22514.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

