Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DWX04_19835 | Not Available | Positive | 4655843 - 4657003 | 42745.5 |
| hypothetical protein | DWX04_19840 | Not Available | Negative | 4657192 - 4657449 | 9309.24 |
| para family protein | DWX04_19845 | Not Available | Negative | 4657454 - 4658212 | 27555.5 |
| hypothetical protein | DWX04_19850 | Not Available | Positive | 4658499 - 4658828 | 12743.1 |
| dna-binding protein | DWX04_19855 | Not Available | Positive | 4658832 - 4659668 | 32322.8 |
| dna resolvase | DWX04_19860 | Not Available | Positive | 4659910 - 4660548 | 23937.1 |
| sensor histidine kinase | DWX04_19865 | Not Available | Negative | 4660787 - 4661266 | 17607.1 |
| radical sam mobile pair protein b | DWX04_19870 | Not Available | Negative | 4661315 - 4662190 | 34028.9 |
| radical sam mobile pair protein a | DWX04_19875 | Not Available | Negative | 4662187 - 4662855 | 26030.2 |
| mbl fold metallo-hydrolase | DWX04_19880 | Not Available | Negative | 4662852 - 4663628 | 28663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

