Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_19670 | Not Available | Positive | 4616640 - 4617335 | 26719.6 |
| glycoside hydrolase family 92 protein | DWX04_19675 | Not Available | Positive | 4617429 - 4619651 | 83587.0 |
| rna polymerase sigma-70 factor | DWX04_19680 | Not Available | Positive | 4619856 - 4620431 | 22588.5 |
| duf4974 domain-containing protein | DWX04_19685 | Not Available | Positive | 4620460 - 4621452 | 37996.7 |
| glycoside hydrolase family 92 protein | DWX04_19690 | Not Available | Positive | 4621470 - 4623752 | 86478.6 |
| glycoside hydrolase family 92 protein | DWX04_19695 | Not Available | Positive | 4623782 - 4626094 | 87838.7 |
| susc/raga family tonb-linked outer membrane protein | DWX04_19705 | Not Available | Positive | 4626383 - 4629784 | 124901.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWX04_19710 | Not Available | Positive | 4629808 - 4631577 | 66868.9 |
| endonuclease | DWX04_19715 | Not Available | Positive | 4631621 - 4632466 | 31930.9 |
| glycoside hydrolase family 97 protein | DWX04_19720 | Not Available | Positive | 4632654 - 4634669 | 75790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

