Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3244 domain-containing protein | DWX04_01580 | Not Available | Positive | 360294 - 360665 | 14228.2 |
| hypothetical protein | DWX04_01585 | Not Available | Positive | 360677 - 361249 | 22459.1 |
| hemolysin | DWX04_01590 | Not Available | Positive | 361279 - 362139 | 32374.2 |
| hypothetical protein | DWX04_01595 | Not Available | Positive | 362152 - 362466 | 11905.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DWX04_01600 | Not Available | Negative | 362553 - 362999 | 16503.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DWX04_01605 | Not Available | Negative | 363018 - 364073 | 40182.2 |
| trna pseudouridine(55) synthase trub | DWX04_01610 | Not Available | Negative | 364085 - 364792 | 26653.3 |
| undecaprenyl-diphosphatase | DWX04_01615 | Not Available | Negative | 364797 - 365597 | 28480.0 |
| duf3098 domain-containing protein | DWX04_01620 | Not Available | Negative | 365635 - 365880 | 9145.44 |
| abc transporter permease | DWX04_01625 | Not Available | Negative | 365893 - 366762 | 32622.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

