Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DWX04_19510 | Not Available | Positive | 4580426 - 4581481 | 39848.0 |
| o-succinylbenzoic acid--coa ligase | DWX04_19515 | Not Available | Positive | 4581478 - 4582563 | 40588.3 |
| arac family transcriptional regulator | DWX04_19520 | Not Available | Positive | 4582819 - 4583703 | 34283.2 |
| duf4250 domain-containing protein | DWX04_19525 | Not Available | Negative | 4583766 - 4583942 | 6921.42 |
| hypothetical protein | DWX04_19530 | Not Available | Positive | 4584072 - 4584380 | 11743.6 |
| aaa family atpase | DWX04_19535 | Not Available | Positive | 4584996 - 4586495 | 57101.1 |
| dna-binding protein | DWX04_19545 | Not Available | Negative | 4587484 - 4588029 | 21159.1 |
| molecular chaperone dnak | DWX04_19550 | Not Available | Negative | 4588223 - 4590136 | 68317.1 |
| meta domain-containing protein | DWX04_19555 | Not Available | Negative | 4590465 - 4591256 | 28683.9 |
| hypothetical protein | DWX04_19560 | Not Available | Positive | 4591381 - 4592634 | 47770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

