Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DWX04_19410 | Not Available | Positive | 4554303 - 4555628 | 50388.9 |
| integrase | DWX04_19415 | Not Available | Positive | 4556115 - 4557470 | 53228.1 |
| hypothetical protein | DWX04_19420 | Not Available | Positive | 4557545 - 4559020 | 58437.6 |
| duf3853 family protein | DWX04_19425 | Not Available | Positive | 4559192 - 4559545 | 13256.0 |
| hypothetical protein | DWX04_19430 | Not Available | Positive | 4559551 - 4560666 | 40922.5 |
| hypothetical protein | DWX04_19435 | Not Available | Positive | 4560687 - 4561655 | 35716.9 |
| leucine-rich repeat domain-containing protein | DWX04_19440 | Not Available | Positive | 4561861 - 4562316 | 17049.5 |
| hypothetical protein | DWX04_19445 | Not Available | Positive | 4562563 - 4562957 | 14775.3 |
| crispr-associated endonuclease cas2 | DWX04_19450 | Not Available | Negative | 4563105 - 4563437 | 12889.6 |
| type ii crispr-associated endonuclease cas1 | DWX04_19455 | Not Available | Negative | 4563437 - 4564369 | 35051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

