Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit i | DWX04_19355 | Not Available | Positive | 4543176 - 4543628 | 16944.7 |
| nadh-quinone oxidoreductase subunit j | DWX04_19360 | Not Available | Positive | 4543644 - 4544147 | 18206.2 |
| nadh-quinone oxidoreductase subunit nuok | DWX04_19365 | Not Available | Positive | 4544153 - 4544461 | 11758.6 |
| nadh-quinone oxidoreductase subunit l | DWX04_19370 | Not Available | Positive | 4544464 - 4546365 | 70327.3 |
| nadh-quinone oxidoreductase subunit m | DWX04_19375 | Not Available | Positive | 4546419 - 4547900 | 53794.6 |
| nadh-quinone oxidoreductase subunit n | DWX04_19380 | Not Available | Positive | 4547932 - 4549353 | 52268.5 |
| glucuronyl hydrolase | DWX04_19385 | Not Available | Positive | 4549529 - 4550755 | 46658.1 |
| atp-binding protein | DWX04_19390 | Not Available | Negative | 4550757 - 4550999 | 8923.97 |
| glycoside hydrolase family 28 protein | DWX04_19400 | Not Available | Positive | 4551434 - 4552840 | 52404.7 |
| gtp-binding protein | DWX04_19405 | Not Available | Negative | 4552904 - 4554154 | 47753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

