Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DWX04_19305 | Not Available | Negative | 4530674 - 4533139 | 92816.0 |
| gscfa domain protein | DWX04_19310 | Not Available | Negative | 4533115 - 4534101 | 38669.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWX04_19315 | Not Available | Positive | 4534194 - 4536092 | 70268.9 |
| trk system potassium transporter trka | DWX04_19320 | Not Available | Positive | 4536105 - 4537445 | 49307.5 |
| trkh family potassium uptake protein | DWX04_19325 | Not Available | Positive | 4537445 - 4538899 | 53448.3 |
| hypothetical protein | DWX04_19330 | Not Available | Positive | 4539002 - 4539379 | 14644.8 |
| nadh-quinone oxidoreductase subunit a | DWX04_19335 | Not Available | Positive | 4539483 - 4539833 | 13099.5 |
| nadh-quinone oxidoreductase subunit b | DWX04_19340 | Not Available | Positive | 4539824 - 4540420 | 22081.9 |
| nadh-quinone oxidoreductase subunit c/d | DWX04_19345 | Not Available | Positive | 4540417 - 4541976 | 59743.6 |
| nadh-quinone oxidoreductase subunit h | DWX04_19350 | Not Available | Positive | 4542100 - 4543176 | 40265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

