Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | DWX04_19255 | Not Available | Negative | 4516513 - 4516938 | 16211.7 |
| heavy metal translocating p-type atpase | DWX04_19260 | Not Available | Negative | 4516952 - 4518670 | 62517.3 |
| esterase family protein | DWX04_19265 | Not Available | Positive | 4518768 - 4519586 | 30789.0 |
| sdr family oxidoreductase | DWX04_19270 | Not Available | Positive | 4519591 - 4520349 | 27233.0 |
| fic family protein | DWX04_19275 | Not Available | Positive | 4520501 - 4521502 | 38203.1 |
| hypothetical protein | DWX04_19280 | Not Available | Negative | 4521693 - 4522388 | 26672.1 |
| glycoside hydrolase family 28 protein | DWX04_19285 | Not Available | Positive | 4523865 - 4525358 | 55358.7 |
| beta-galactosidase | DWX04_19290 | Not Available | Positive | 4525635 - 4528523 | 108911.0 |
| exopolygalacturonase | DWX04_19295 | Not Available | Positive | 4528565 - 4529869 | 49186.9 |
| duf4858 domain-containing protein | DWX04_19300 | Not Available | Negative | 4530021 - 4530584 | 21541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

