Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DWX04_19200 | Not Available | Negative | 4505673 - 4506629 | 36556.1 |
| mobilization protein | DWX04_19205 | Not Available | Negative | 4506842 - 4507918 | 41064.5 |
| duf3853 family protein | DWX04_19210 | Not Available | Negative | 4507933 - 4508241 | 11386.1 |
| hypothetical protein | DWX04_19215 | Not Available | Negative | 4508466 - 4509509 | 41683.3 |
| duf1016 family protein | DWX04_19220 | Not Available | Negative | 4509518 - 4510813 | 49049.6 |
| site-specific integrase | DWX04_19225 | Not Available | Negative | 4510877 - 4512160 | 50235.1 |
| ph domain-containing protein | DWX04_19230 | Not Available | Negative | 4512933 - 4513376 | 16634.7 |
| hypothetical protein | DWX04_19235 | Not Available | Negative | 4513545 - 4513979 | 16911.9 |
| crp/fnr family transcriptional regulator | DWX04_19245 | Not Available | Positive | 4514508 - 4515071 | 22255.1 |
| acyltransferase | DWX04_19250 | Not Available | Positive | 4515189 - 4516340 | 43081.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

